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R. norvegicus Gene: Stxbp2 - ENSRNOG00000000994 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000994
NameStxbp2
Descriptionsyntaxin binding protein 2 [Source:RGD Symbol;Acc:619967]
OrganismRattus norvegicus (rat)
Synonym(s)munc18-2, munc18b, unc-18b, unc18-2
Orthologs(s)17 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.06e3
  • 2.06e3
  • 5.03e3
92.49
  • 92.49
  • 81.66
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
2.36e3
  • 2.36e3
91.42
  • 91.42
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
2.44e3
  • 2.44e3
91.11
  • 91.11
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
2.52e3
  • 2.52e3
90.82
  • 90.82
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
2.59e3
  • 2.59e3
90.57
  • 90.57
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.70e3
  • 2.70e3
90.18
  • 90.18
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
2.72e3
  • 2.72e3
90.11
  • 90.11
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.05e3
  • 3.05e3
88.89
  • 88.89
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.17e3
  • 3.17e3
88.47
  • 88.47
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
3.17e3
  • 3.17e3
88.46
  • 88.46
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
3.85e3
  • 3.85e3
85.98
  • 85.98
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
3.96e3
  • 3.96e3
85.59
  • 85.59
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
4.14e3
  • 4.14e3
84.92
  • 84.92
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
4.18e3
  • 4.18e3
  • 5.28e3
  • 5.75e3
84.78
  • 84.78
  • 80.77
  • 79.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.53e3
  • 4.53e3
  • 1.30e4
83.51
  • 83.51
  • 52.78
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
5.77e3
  • 5.77e3
78.98
  • 78.98
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
63.34
  • 63.34
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
  • 1.31e4
54.58
  • 54.58
  • 52.23
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
53.74
  • 53.74
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.29e4
  • 1.29e4
53.14
  • 53.14
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
51.89
  • 51.89
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
  • 1.49e4
45.83
  • 45.83
  • 45.74
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000000994.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eumetazoa2 genesCompare expression
Eukaryota3 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000000994.

Cross-references

EnsemblENSRNOG00000000994 (Stxbp2)
RGD619967 (Stxbp2)
EMBLAABR07034961, CH474084
Uniprot/SPTREMBLG3V637, G3V637_RAT

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