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R. norvegicus Gene: Sirt4 - ENSRNOG00000001151 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000001151
NameSirt4
Descriptionsirtuin 4 [Source:RGD Symbol;Acc:1310413]
OrganismRattus norvegicus (rat)
Synonym(s)loc304539, sirt4_predicted
Orthologs(s)24 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.05e3
  • 7.05e3
  • 8.81e3
74.33
  • 74.33
  • 67.90
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.36e3
  • 7.36e3
  • 1.28e4
73.18
  • 73.18
  • 53.28
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
8.84e3
  • 8.84e3
  • 9.23e3
  • 9.63e3
67.79
  • 67.79
  • 66.39
  • 64.91
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
9.62e3
  • 9.62e3
64.97
  • 64.97
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
9.68e3
  • 9.68e3
64.73
  • 64.73
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
9.79e3
  • 9.79e3
64.33
  • 64.33
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
9.94e3
  • 9.94e3
63.79
  • 63.79
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
63.20
  • 63.20
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
60.38
  • 60.38
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
59.71
  • 59.71
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
59.64
  • 59.64
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
59.35
  • 59.35
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
58.80
  • 58.80
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
58.00
  • 58.00
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
57.97
  • 57.97
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
57.72
  • 57.72
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
57.13
  • 57.13
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
57.06
  • 57.06
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
55.98
  • 55.98
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
  • 1.32e4
55.09
  • 55.09
  • 51.89
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
53.21
  • 53.21
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria23 species24 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000001151.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota5 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000001151.

Cross-references

EnsemblENSRNOG00000001151 (Sirt4)
RGD1310413 (Sirt4)
EMBLAC097575, BC167005, CH473973
Uniprot/SPTREMBLB2RZ30, B2RZ30_RAT, G3V641, G3V641_RAT

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