R. norvegicus Gene: Hnf1a - ENSRNOG00000001183 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000001183
NameHnf1a
DescriptionHNF1 homeobox A [Source:RGD Symbol;Acc:3828]
OrganismRattus norvegicus (rat)
Synonym(s)hnf-1, hnf-1-alpha, hnf-1a, hnf1, lf-b1, lfb1, tcf-1, tcf1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
4.11e3
  • 4.11e3
  • 5.19e3
85.00664
  • 85.00664
  • 81.05971
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
4.58e3
  • 4.58e3
83.29343
  • 83.29343
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
5.96e3
  • 5.96e3
78.26174
  • 78.26174
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
6.00e3
  • 6.00e3
78.12270
  • 78.12270
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
6.72e3
  • 6.72e3
75.50268
  • 75.50268
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
8.78e3
  • 8.78e3
67.96251
  • 67.96251
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
8.85e3
  • 8.85e3
67.72032
  • 67.72032
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
9.20e3
  • 9.20e3
66.46070
  • 66.46070
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
56.80939
  • 56.80939
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.50e4
  • 1.50e4
45.44626
  • 45.44626
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.51e4
  • 1.51e4
  • 1.69e4
44.86997
  • 44.86997
  • 38.28132
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.59e4
  • 1.59e4
42.15760
  • 42.15760
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.60e4
  • 1.60e4
41.67564
  • 41.67564
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.64e4
  • 1.64e4
40.16446
  • 40.16446
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.82e4
  • 1.82e4
33.52617
  • 33.52617
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.94e4
  • 1.94e4
29.07813
  • 29.07813
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLJ03170, X53297, X54423, X67649
EnsemblENSRNOG00000001183 (Hnf1a)
RGD3828 (Hnf1a)
Uniprot/SWISSPROTHNF1A_RAT, P15257

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