R. norvegicus Gene: Hnf1a - ENSRNOG00000001183 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000001183
NameHnf1a
DescriptionHNF1 homeobox A [Source:RGD Symbol;Acc:3828]
OrganismRattus norvegicus (rat)
Synonym(s)hnf-1, hnf-1-alpha, hnf-1a, hnf1, lf-b1, lfb1, tcf-1, tcf1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
4.09e3
  • 4.09e3
84.72706
  • 84.72706
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
4.41e3
  • 4.41e3
83.53322
  • 83.53322
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
8.15e3
  • 8.15e3
69.56927
  • 69.56927
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
55.75519
  • 55.75519
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.60e4
  • 1.60e4
40.25923
  • 40.25923
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.63e4
  • 1.63e4
39.03819
  • 39.03819
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.82e4
  • 1.82e4
31.91261
  • 31.91261
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.85e4
  • 1.85e4
30.88145
  • 30.88145
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLJ03170, X53297, X54423, X67649
EnsemblENSRNOG00000001183 (Hnf1a)
RGD3828 (Hnf1a)
Uniprot/SWISSPROTHNF1A_RAT, P15257

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