We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

R. norvegicus Gene: Hvcn1 - ENSRNOG00000001270 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000001270
NameHvcn1
Descriptionhydrogen voltage-gated channel 1 [Source:RGD Symbol;Acc:1310788]
OrganismRattus norvegicus (rat)
Synonym(s)loc304485, rgd1310788
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.18e3
  • 1.18e3
95.70
  • 95.70
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
5.38e3
  • 5.38e3
80.42
  • 80.42
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.96e3
  • 6.96e3
74.64
  • 74.64
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.59e3
  • 8.59e3
  • 1.75e4
68.71
  • 68.71
  • 36.07
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
8.74e3
  • 8.74e3
68.16
  • 68.16
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
63.36
  • 63.36
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
59.64
  • 59.64
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
58.62
  • 58.62
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
57.89
  • 57.89
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
57.12
  • 57.12
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
1.19e4
  • 1.19e4
  • 1.25e4
  • 1.69e4
56.57
  • 56.57
  • 54.33
  • 38.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.41
  • 56.41
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
54.08
  • 54.08
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
53.20
  • 53.20
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
  • 1.47e4
52.54
  • 52.54
  • 46.55
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
51.41
  • 51.41
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
50.64
  • 50.64
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
48.66
  • 48.66
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
47.56
  • 47.56
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000001270.

Cross-references

EnsemblENSRNOG00000001270 (Hvcn1)
RGD1310788 (Hvcn1)
EMBLAC127875
Uniprot/SPTREMBLD3ZIU8, D3ZIU8_RAT

Do not show this banner again