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R. norvegicus Gene: Cldn14 - ENSRNOG00000001691 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000001691
NameCldn14
Descriptionclaudin 14 [Source:RGD Symbol;Acc:1309165]
OrganismRattus norvegicus (rat)
Synonym(s)loc304073, mgc109472
Orthologs(s)18 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
4.18e3
  • 4.18e3
  • 4.67e3
  • 4.72e3
84.77
  • 84.77
  • 82.99
  • 82.81
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
  • 1.89e4
54.57
  • 54.57
  • 30.97
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
40.03
  • 40.03
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.73e4
  • 1.73e4
36.84
  • 36.84
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.79e4
  • 1.79e4
34.83
  • 34.83
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.96e4
  • 1.96e4
28.62
  • 28.62
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
2.19e4
  • 2.19e4
20.27
  • 20.27
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.38e4
  • 2.38e4
13.22
  • 13.22
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000001691.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata6 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000001691.

Cross-references

EnsemblENSRNOG00000001691 (Cldn14)
RGD1309165 (Cldn14)
EMBLAABR07033664, BC091387, CH474083
Uniprot/SPTREMBLQ5BJQ1, Q5BJQ1_RAT

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