R. norvegicus Gene: Pcyt1a - ENSRNOG00000001762 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000001762
NamePcyt1a
Descriptionphosphate cytidylyltransferase 1, choline, alpha [Source:RGD Symbol;Acc:70515]
OrganismRattus norvegicus (rat)
Synonym(s)cct a, cct-alpha, ct a, ctp, ctpct, mgc93248, pcyt1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
2.05e3
  • 2.05e3
92.34169
  • 92.34169
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.18e3
  • 2.18e3
91.85522
  • 91.85522
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
4.07e3
  • 4.07e3
84.79454
  • 84.79454
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
4.32e3
  • 4.32e3
83.86504
  • 83.86504
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
4.82e3
  • 4.82e3
82.00112
  • 82.00112
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
4.94e3
  • 4.94e3
81.53344
  • 81.53344
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
6.22e3
  • 6.22e3
76.75288
  • 76.75288
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.92e3
  • 6.92e3
74.13802
  • 74.13802
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
7.17e3
  • 7.17e3
73.21256
  • 73.21256
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
9.95e3
  • 9.95e3
  • 1.00e4
62.83818
  • 62.83818
  • 62.56329
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLBC085713, L13245, M36071, U03490
EnsemblENSRNOG00000001762 (Pcyt1a)
RGD70515 (Pcyt1a)
Uniprot/SWISSPROTP19836, PCY1A_RAT

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