R. norvegicus Gene: Itsn1 - ENSRNOG00000002001 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000002001
NameItsn1
Descriptionintersectin 1 (SH3 domain protein) [Source:RGD Symbol;Acc:2935]
OrganismRattus norvegicus (rat)
Synonym(s)itsn

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
2.90e3
  • 2.90e3
89.44
  • 89.44
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.27e3
  • 3.27e3
  • 5.54e3
88.06
  • 88.06
  • 79.80
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
4.13e3
  • 4.13e3
84.94
  • 84.94
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.62e3
  • 4.62e3
  • 9.25e3
83.15
  • 83.15
  • 66.25
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
4.86e3
  • 4.86e3
82.26
  • 82.26
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
5.65e3
  • 5.65e3
79.41
  • 79.41
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
5.78e3
  • 5.78e3
  • 6.89e3
78.92
  • 78.92
  • 74.86
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
6.46e3
  • 6.46e3
76.44
  • 76.44
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
6.59e3
  • 6.59e3
75.95
  • 75.95
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
6.66e3
  • 6.66e3
75.72
  • 75.72
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
6.71e3
  • 6.71e3
75.53
  • 75.53
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
7.21e3
  • 7.21e3
73.69
  • 73.69
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
8.30e3
  • 8.30e3
69.75
  • 69.75
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
8.41e3
  • 8.41e3
69.32
  • 69.32
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
9.08e3
  • 9.08e3
66.87
  • 66.87
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
9.16e3
  • 9.16e3
66.59
  • 66.59
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
9.56e3
  • 9.56e3
65.15
  • 65.15
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
  • 2.26e4
59.38
  • 59.38
  • 17.63
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
57.63
  • 57.63
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
52.44
  • 52.44
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAC123507, AC142009, CH473989
EnsemblENSRNOG00000002001 (Itsn1)
RGD2935 (Itsn1)
Uniprot/SPTREMBLD3ZV52, D3ZV52_RAT, F1M823, F1M823_RAT

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