R. norvegicus Gene: Tgfbr3 - ENSRNOG00000002093 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000002093
NameTgfbr3
Descriptiontransforming growth factor, beta receptor III [Source:RGD Symbol;Acc:61821]
OrganismRattus norvegicus (rat)
Synonym(s)betaglycan, tgfr-3
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.88e3
  • 2.88e3
89.52
  • 89.52
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
3.28e3
  • 3.28e3
88.07
  • 88.07
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.02e3
  • 5.02e3
81.73
  • 81.73
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
5.26e3
  • 5.26e3
80.83
  • 80.83
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
5.50e3
  • 5.50e3
79.98
  • 79.98
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
5.90e3
  • 5.90e3
78.52
  • 78.52
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
6.42e3
  • 6.42e3
76.62
  • 76.62
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
6.46e3
  • 6.46e3
76.46
  • 76.46
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.75e3
  • 6.75e3
75.40
  • 75.40
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
7.28e3
  • 7.28e3
73.50
  • 73.50
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
7.58e3
  • 7.58e3
72.39
  • 72.39
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.76e3
  • 7.76e3
  • 1.13e4
71.73
  • 71.73
  • 58.71
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
7.79e3
  • 7.79e3
71.62
  • 71.62
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
  • RnorDv:00000194-6-month-old stage (rat)
8.43e3
  • 8.43e3
  • 8.53e3
  • 8.67e3
69.28
  • 69.28
  • 68.93
  • 68.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
9.14e3
  • 9.14e3
66.71
  • 66.71
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
9.70e3
  • 9.70e3
64.67
  • 64.67
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.86e3
  • 9.86e3
  • 1.05e4
64.08
  • 64.08
  • 61.62
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.00e4
  • 1.00e4
63.49
  • 63.49
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
61.67
  • 61.67
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.16e4
  • 1.16e4
  • 1.19e4
57.84
  • 57.84
  • 56.52
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000002093.

Cross-references

EnsemblENSRNOG00000002093 (Tgfbr3)
RGD61821 (Tgfbr3)
EMBLM77809, M80784
Uniprot/SWISSPROTP26342, TGBR3_RAT

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