R. norvegicus Gene: Sec31a - ENSRNOG00000002251 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000002251
NameSec31a
DescriptionSEC31 homolog A, COPII coat complex component [Source:RGD Symbol;Acc:620233]
OrganismRattus norvegicus (rat)
Synonym(s)mgc93320, sec31l1, vap1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
2.48e3
  • 2.48e3
90.96688
  • 90.96688
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.51e3
  • 2.51e3
90.86114
  • 90.86114
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
2.82e3
  • 2.82e3
89.70347
  • 89.70347
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.87e3
  • 2.87e3
89.54751
  • 89.54751
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
3.02e3
  • 3.02e3
88.98789
  • 88.98789
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
3.02e3
  • 3.02e3
88.98381
  • 88.98381
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
3.03e3
  • 3.03e3
88.93920
  • 88.93920
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
3.09e3
  • 3.09e3
  • 3.16e3
88.74330
  • 88.74330
  • 88.47113
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.11e3
  • 3.11e3
88.67509
  • 88.67509
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
3.22e3
  • 3.22e3
88.25178
  • 88.25178
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.35e3
  • 3.35e3
  • 3.65e3
87.77386
  • 87.77386
  • 86.67615
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
3.45e3
  • 3.45e3
87.40293
  • 87.40293
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
3.53e3
  • 3.53e3
87.13364
  • 87.13364
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
3.53e3
  • 3.53e3
87.11672
  • 87.11672
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.63e3
  • 3.63e3
  • 5.76e3
86.74910
  • 86.74910
  • 78.99533
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.04e3
  • 4.04e3
85.28143
  • 85.28143
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
4.20e3
  • 4.20e3
84.69012
  • 84.69012
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
4.52e3
  • 4.52e3
83.50487
  • 83.50487
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.56e3
  • 5.56e3
  • 5.99e3
79.73903
  • 79.73903
  • 78.17015
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
5.60e3
  • 5.60e3
79.56520
  • 79.56520
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.18e4
  • 1.18e4
  • 1.20e4
56.93880
  • 56.93880
  • 56.15731
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07072372, AC099384, CH474022
EnsemblENSRNOG00000002251 (Sec31a)
RGD620233 (Sec31a)
Uniprot/SPTREMBLA0A0G2K0X9, A0A0G2K0X9_RAT, G3V699, G3V699_RAT
Uniprot/SWISSPROTQ9Z2Q1, SC31A_RAT

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