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R. norvegicus Gene: Tmem150c - ENSRNOG00000002258 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000002258
NameTmem150c
Descriptiontransmembrane protein 150C [Source:RGD Symbol;Acc:1306105]
OrganismRattus norvegicus (rat)
Synonym(s)loc360916, rgd1306105
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.96e3
  • 2.96e3
  • 4.59e3
89.21
  • 89.21
  • 83.29
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.50e3
  • 3.50e3
  • 5.18e3
87.26
  • 87.26
  • 81.13
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
3.51e3
  • 3.51e3
  • 3.53e3
87.21
  • 87.21
  • 87.14
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
4.42e3
  • 4.42e3
83.89
  • 83.89
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
4.63e3
  • 4.63e3
  • 8.67e3
  • 8.92e3
83.12
  • 83.12
  • 68.42
  • 67.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
5.53e3
  • 5.53e3
79.87
  • 79.87
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
7.55e3
  • 7.55e3
72.50
  • 72.50
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
8.57e3
  • 8.57e3
68.78
  • 68.78
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.99e3
  • 8.99e3
  • 1.68e4
67.27
  • 67.27
  • 38.81
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
9.12e3
  • 9.12e3
66.78
  • 66.78
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
9.26e3
  • 9.26e3
66.28
  • 66.28
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
9.66e3
  • 9.66e3
64.81
  • 64.81
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
60.69
  • 60.69
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
59.38
  • 59.38
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
59.30
  • 59.30
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
56.95
  • 56.95
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.40
  • 56.40
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.22
  • 56.22
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
54.54
  • 54.54
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
54.25
  • 54.25
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
53.22
  • 53.22
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
51.70
  • 51.70
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000002258.

Cross-references

EnsemblENSRNOG00000002258 (Tmem150c)
RGD1306105 (Tmem150c)
EMBLBC169066, CH474022
Uniprot/SWISSPROTB5DFH9, T150C_RAT

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