R. norvegicus Gene: Lnx1 - ENSRNOG00000002272 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000002272
NameLnx1
Descriptionligand of numb-protein X 1, E3 ubiquitin protein ligase [Source:RGD Symbol;Acc:1308159]
OrganismRattus norvegicus (rat)
Synonym(s)lnx1_predicted, loc360926

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
3.07e3
  • 3.07e3
88.81099
  • 88.81099
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
4.91e3
  • 4.91e3
82.09957
  • 82.09957
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
5.96e3
  • 5.96e3
78.27767
  • 78.27767
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.67e3
  • 6.67e3
  • 7.83e3
75.68720
  • 75.68720
  • 71.45078
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
6.76e3
  • 6.76e3
75.33753
  • 75.33753
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
6.85e3
  • 6.85e3
75.01674
  • 75.01674
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.87e3
  • 6.87e3
74.94715
  • 74.94715
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
7.05e3
  • 7.05e3
74.29956
  • 74.29956
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
7.11e3
  • 7.11e3
74.07109
  • 74.07109
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
7.57e3
  • 7.57e3
72.38432
  • 72.38432
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
8.59e3
  • 8.59e3
68.65452
  • 68.65452
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
9.83e3
  • 9.83e3
64.15687
  • 64.15687
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
9.91e3
  • 9.91e3
63.86753
  • 63.86753
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
62.78586
  • 62.78586
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
60.08783
  • 60.08783
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
57.04198
  • 57.04198
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
54.65328
  • 54.65328
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
1.25e4
  • 1.25e4
  • 1.41e4
54.27483
  • 54.27483
  • 48.55115
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
53.24547
  • 53.24547
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
  • 1.30e4
52.59171
  • 52.59171
  • 52.53467
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
  • 1.48e4
52.04800
  • 52.04800
  • 46.10592
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

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