R. norvegicus Gene: Hlx - ENSRNOG00000002309 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000002309
NameHlx
DescriptionH2.0-like homeobox [Source:RGD Symbol;Acc:1311961]
OrganismRattus norvegicus (rat)
Synonym(s)hlx1, loc364069, mgc156701

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
5.87e3
  • 5.87e3
78.57946
  • 78.57946
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
7.03e3
  • 7.03e3
74.36981
  • 74.36981
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
7.89e3
  • 7.89e3
71.21527
  • 71.21527
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
7.92e3
  • 7.92e3
71.12642
  • 71.12642
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
8.44e3
  • 8.44e3
69.21888
  • 69.21888
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
8.83e3
  • 8.83e3
67.80822
  • 67.80822
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
9.23e3
  • 9.23e3
66.32090
  • 66.32090
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
9.90e3
  • 9.90e3
63.90696
  • 63.90696
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
9.92e3
  • 9.92e3
63.82113
  • 63.82113
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
61.54729
  • 61.54729
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
  • 1.08e4
61.48878
  • 61.48878
  • 60.54488
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
61.18598
  • 61.18598
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
58.68045
  • 58.68045
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
58.15735
  • 58.15735
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
56.60109
  • 56.60109
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.23e4
  • 1.23e4
55.05551
  • 55.05551
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
53.91910
  • 53.91910
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
  • 1.65e4
53.61637
  • 53.61637
  • 39.85790
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.52e4
  • 1.52e4
44.68702
  • 44.68702
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
  • 1.66e4
42.47037
  • 42.47037
  • 39.39629
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.77e4
  • 1.77e4
  • 2.26e4
35.44950
  • 35.44950
  • 17.62593
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC127513
EnsemblENSRNOG00000002309 (Hlx)
RGD1311961 (Hlx)
Uniprot/SWISSPROTA0JPN1, HLX_RAT

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