R. norvegicus Gene: Abat - ENSRNOG00000002636 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000002636
NameAbat
Description4-aminobutyrate aminotransferase [Source:RGD Symbol;Acc:620948]
OrganismRattus norvegicus (rat)
Synonym(s)beta-alaat, gaba-at, gaba-t, gabat, l-aibat, mgc93392, o70539, q66hm1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.14e3
  • 1.14e3
95.74159
  • 95.74159
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
1.21e3
  • 1.21e3
95.46611
  • 95.46611
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.72e3
  • 1.72e3
93.56214
  • 93.56214
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
7.13e3
  • 7.13e3
73.37756
  • 73.37756
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.36e4
  • 1.36e4
  • 1.37e4
49.05321
  • 49.05321
  • 48.76061
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
46.51861
  • 46.51861
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
45.52728
  • 45.52728
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.78e4
  • 1.78e4
33.55403
  • 33.55403
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.82e4
  • 1.82e4
32.14038
  • 32.14038
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.86e4
  • 1.86e4
30.38014
  • 30.38014
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLBC081787, D87839, U29701
EnsemblENSRNOG00000002636 (Abat)
RGD620948 (Abat)
Uniprot/SWISSPROTGABT_RAT, P50554

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