R. norvegicus Gene: Clcn5 - ENSRNOG00000002862 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000002862
NameClcn5
Descriptionchloride channel, voltage-sensitive 5 [Source:RGD Symbol;Acc:2362]
OrganismRattus norvegicus (rat)
Synonym(s)clc-5, clc5, p70642

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
6.64e3
  • 6.64e3
75.78
  • 75.78
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
7.53e3
  • 7.53e3
72.53
  • 72.53
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
8.24e3
  • 8.24e3
69.95
  • 69.95
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
9.32e3
  • 9.32e3
66.00
  • 66.00
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
58.71
  • 58.71
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
57.38
  • 57.38
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
56.45
  • 56.45
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
56.43
  • 56.43
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.24
  • 56.24
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.07
  • 56.07
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.29e4
  • 1.29e4
52.93
  • 52.93
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
52.19
  • 52.19
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
51.97
  • 51.97
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
50.10
  • 50.10
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
48.28
  • 48.28
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
  • 1.54e4
46.58
  • 46.58
  • 43.81
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
44.25
  • 44.25
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.56e4
  • 1.56e4
43.15
  • 43.15
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.65e4
  • 1.65e4
  • 2.26e4
39.90
  • 39.90
  • 17.63
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07037207, AABR07037208, D50497, Z56277
EnsemblENSRNOG00000002862 (Clcn5)
RGD2362 (Clcn5)
Uniprot/SPTREMBLA0A0G2K839, A0A0G2K839_RAT
Uniprot/SWISSPROTCLCN5_RAT, P51796

Do not show this banner again