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R. norvegicus Gene: Gabra6 - ENSRNOG00000003569 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000003569
NameGabra6
Descriptiongamma-aminobutyric acid (GABA) A receptor, alpha 6 [Source:RGD Symbol;Acc:61861]
OrganismRattus norvegicus (rat)
Orthologs(s)16 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
786
  • 786
97.14
  • 97.14
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.48e4
  • 1.48e4
46.11
  • 46.11
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.76e4
  • 1.76e4
36.00
  • 36.00
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.77e4
  • 1.77e4
  • 1.86e4
35.69
  • 35.69
  • 32.22
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.94e4
  • 1.94e4
29.26
  • 29.26
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
2.01e4
  • 2.01e4
26.78
  • 26.78
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.17e4
  • 2.17e4
21.01
  • 21.01
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
2.23e4
  • 2.23e4
18.85
  • 18.85
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000003569.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000003569.

Cross-references

EnsemblENSRNOG00000003569 (Gabra6)
RGD61861 (Gabra6)
EMBLAABR07029412, CH473948
Uniprot/SPTREMBLG3V6G3, G3V6G3_RAT

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