R. norvegicus Gene: Col1a1 - ENSRNOG00000003897 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000003897
NameCol1a1
Descriptioncollagen, type I, alpha 1 [Source:RGD Symbol;Acc:61817]
OrganismRattus norvegicus (rat)
Synonym(s)a3kna1, colia1, p02455, q63079

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
126
  • 126
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.19e3
  • 1.19e3
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.42e3
  • 1.42e3
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.21e3
  • 3.21e3
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
3.84e3
  • 3.84e3
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
4.50e3
  • 4.50e3
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
6.21e3
  • 6.21e3
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
7.30e3
  • 7.30e3
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
7.84e3
  • 7.84e3
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.62e4
  • 1.62e4
  • 1.64e4
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLBC133728, CH473948, M11432, Z78279
EnsemblENSRNOG00000003897 (Col1a1)
RGD61817 (Col1a1)
Uniprot/SWISSPROTCO1A1_RAT, P02454

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