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R. norvegicus Gene: Dnajc27 - ENSRNOG00000003988 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000003988
NameDnajc27
DescriptionDnaJ (Hsp40) homolog, subfamily C, member 27 [Source:RGD Symbol;Acc:1564414]
OrganismRattus norvegicus (rat)
Synonym(s)rbj
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.97e3
  • 1.97e3
  • 2.42e3
92.83
  • 92.83
  • 91.19
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.04e3
  • 2.04e3
  • 2.09e3
92.59
  • 92.59
  • 92.39
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.87e3
  • 2.87e3
  • 3.29e3
89.53
  • 89.53
  • 88.00
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
3.20e3
  • 3.20e3
  • 3.30e3
88.33
  • 88.33
  • 87.98
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
3.22e3
  • 3.22e3
88.26
  • 88.26
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
3.85e3
  • 3.85e3
85.96
  • 85.96
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
4.70e3
  • 4.70e3
82.89
  • 82.89
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.73e3
  • 5.73e3
79.12
  • 79.12
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
7.47e3
  • 7.47e3
72.79
  • 72.79
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
9.24e3
  • 9.24e3
66.33
  • 66.33
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
9.45e3
  • 9.45e3
65.57
  • 65.57
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
9.95e3
  • 9.95e3
63.76
  • 63.76
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
61.30
  • 61.30
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
60.92
  • 60.92
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
60.88
  • 60.88
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
58.95
  • 58.95
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
58.24
  • 58.24
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
57.17
  • 57.17
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.25
  • 56.25
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
55.82
  • 55.82
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
  • 1.33e4
  • 1.33e4
53.42
  • 53.42
  • 51.60
  • 51.37
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000003988.

Cross-references

EnsemblENSRNOG00000003988 (Dnajc27)
RGD1564414 (Dnajc27)
EMBLAABR07063322, AABR07063323, AY539931, BK001286, DY314277
Uniprot/SPTREMBLQ6QI28, Q6QI28_RAT
Uniprot/SWISSPROTDJC27_RAT, Q6IML7

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