Gene: Atp2b1 - ENSRNOG00000004026 - Rattus norvegicus (rat)

General information

Ensembl ID	ENSRNOG00000004026
Name	Atp2b1
Description	ATPase, Ca++ transporting, plasma membrane 1 [Source:RGD Symbol;Acc:621303]
Organism	Rattus norvegicus (rat)
Synonym(s)	pmca1, pmca1a, pmca1b, pmca1c

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0001954	Ammon's horn	[+] 2 stages RnorDv:00000194-6-month-old stage (rat) UBERON:0000113post-juvenile adult stage	370 370 398	98.65270 98.65270 98.55152	AEIR AEIR AEIR
UBERON:0002114	duodenum	[+] 1 stage UBERON:0000113post-juvenile adult stage	436 436	98.41190 98.41190	AEIR AEIR
UBERON:0001870	frontal cortex	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	677 677 1.08e3	97.53427 97.53427 96.05497	AEIR AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.83e3 1.83e3	93.31327 93.31327	AEIR AEIR
UBERON:0002115	jejunum	[+] 1 stage UBERON:0000113post-juvenile adult stage	2.52e3 2.52e3	90.82427 90.82427	AEIR AEIR
UBERON:0002037	cerebellum	[+] 1 stage UBERON:0000113post-juvenile adult stage	2.60e3 2.60e3	90.52194 90.52194	AEIR AEIR
UBERON:0001155	colon	[+] 1 stage UBERON:0000113post-juvenile adult stage	3.31e3 3.31e3	87.94507 87.94507	AEIR AEIR
UBERON:0002116	ileum	[+] 1 stage UBERON:0000113post-juvenile adult stage	3.84e3 3.84e3	85.99314 85.99314	AEIR AEIR
UBERON:0001377	quadriceps femoris	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.49e3 4.49e3	83.60944 83.60944	AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.54e3 4.54e3	83.43922 83.43922	AEIR AEIR
UBERON:0000082	adult mammalian kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.70e3 4.70e3	82.86446 82.86446	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.85e3 4.85e3	82.31809 82.31809	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000113post-juvenile adult stage	5.33e3 5.33e3	80.57410 80.57410	AEIR AEIR
UBERON:0002107	liver	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0034920infant stage	5.65e3 5.65e3 1.02e4	79.40730 79.40730 62.87128	AEIR AEIR AEIR
UBERON:0000945	stomach	[+] 1 stage UBERON:0000113post-juvenile adult stage	5.70e3 5.70e3	79.21746 79.21746	AEIR AEIR
UBERON:0001043	esophagus	[+] 1 stage UBERON:0000113post-juvenile adult stage	5.71e3 5.71e3	79.19492 79.19492	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000113post-juvenile adult stage	6.24e3 6.24e3	77.25823 77.25823	AEIR AEIR
UBERON:0002370	thymus	[+] 1 stage UBERON:0000113post-juvenile adult stage	6.79e3 6.79e3	75.22172 75.22172	AEIR AEIR
UBERON:0001264	pancreas	[+] 1 stage UBERON:0000113post-juvenile adult stage	7.70e3 7.70e3	71.90451 71.90451	AEIR AEIR
UBERON:0000473	testis	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	1.16e4 1.16e4 1.22e4	57.56188 57.56188 55.55312	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

Affymetrix data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

Affymetrix data: GEO
RNA-Seq data: GEO

Cross-references

EMBL	AABR07056786, AABR07056787, AABR07056788, CH473960
Ensembl	ENSRNOG00000004026 (Atp2b1)
RGD	621303 (Atp2b1)
Uniprot/SPTREMBL	F1LRW6, F1LRW6_RAT
Uniprot/SWISSPROT	AT2B1_RAT, P11505