R. norvegicus Gene: RGD1311745 - ENSRNOG00000004135 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000004135
NameRGD1311745
Descriptionsimilar to RIKEN cDNA 1110059G10 [Source:RGD Symbol;Acc:1311745]
OrganismRattus norvegicus (rat)
Synonym(s)loc301079, mgc94788

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
867
  • 867
  • 2.22e3
96.84138
  • 96.84138
  • 91.89492
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
2.46e3
  • 2.46e3
91.03476
  • 91.03476
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.95e3
  • 2.95e3
89.25893
  • 89.25893
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
3.58e3
  • 3.58e3
86.95857
  • 86.95857
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
3.65e3
  • 3.65e3
  • 4.48e3
86.69107
  • 86.69107
  • 83.64526
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
3.88e3
  • 3.88e3
85.85239
  • 85.85239
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
4.18e3
  • 4.18e3
84.74220
  • 84.74220
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
4.33e3
  • 4.33e3
84.21410
  • 84.21410
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.50e3
  • 4.50e3
  • 9.09e3
83.58566
  • 83.58566
  • 66.83470
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
4.52e3
  • 4.52e3
83.51388
  • 83.51388
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
4.56e3
  • 4.56e3
83.37265
  • 83.37265
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
4.57e3
  • 4.57e3
83.35131
  • 83.35131
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
4.75e3
  • 4.75e3
82.69654
  • 82.69654
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
4.84e3
  • 4.84e3
82.35463
  • 82.35463
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
4.89e3
  • 4.89e3
82.17566
  • 82.17566
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
4.93e3
  • 4.93e3
82.02677
  • 82.02677
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
5.24e3
  • 5.24e3
80.87435
  • 80.87435
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
5.59e3
  • 5.59e3
79.60776
  • 79.60776
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
5.89e3
  • 5.89e3
78.52606
  • 78.52606
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.95e3
  • 6.95e3
74.64883
  • 74.64883
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
7.27e3
  • 7.27e3
  • 7.51e3
73.49229
  • 73.49229
  • 72.59613
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAC133294, BC085913
EnsemblENSRNOG00000004135 (RGD1311745)
RGD1311745 (RGD1311745)
Uniprot/SPTREMBLA0A0G2K0E2, A0A0G2K0E2_RAT
Uniprot/SWISSPROTK1143_RAT, Q5RKH3

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