R. norvegicus Gene: Slc35e4 - ENSRNOG00000004168 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000004168
NameSlc35e4
Descriptionsolute carrier family 35, member E4 [Source:RGD Symbol;Acc:708484]
OrganismRattus norvegicus (rat)
Synonym(s)loc266687, mgc93128
Orthologs(s)15 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
2.70e3
  • 2.70e3
90.15
  • 90.15
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
3.83e3
  • 3.83e3
86.05
  • 86.05
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.04e3
  • 4.04e3
85.28
  • 85.28
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.63e3
  • 4.63e3
  • 5.67e3
83.14
  • 83.14
  • 79.36
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.14e3
  • 5.14e3
  • 7.96e3
81.28
  • 81.28
  • 71.02
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
6.06e3
  • 6.06e3
77.94
  • 77.94
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
6.37e3
  • 6.37e3
76.80
  • 76.80
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
7.54e3
  • 7.54e3
72.53
  • 72.53
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
7.56e3
  • 7.56e3
72.45
  • 72.45
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
8.15e3
  • 8.15e3
70.32
  • 70.32
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
8.24e3
  • 8.24e3
69.99
  • 69.99
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
8.35e3
  • 8.35e3
69.58
  • 69.58
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
9.12e3
  • 9.12e3
66.78
  • 66.78
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
9.75e3
  • 9.75e3
64.48
  • 64.48
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
9.85e3
  • 9.85e3
  • 1.00e4
64.11
  • 64.11
  • 63.46
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
9.95e3
  • 9.95e3
63.75
  • 63.75
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
63.37
  • 63.37
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
59.70
  • 59.70
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
  • 1.47e4
58.98
  • 58.98
  • 46.54
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
1.18e4
  • 1.18e4
  • 1.22e4
  • 1.31e4
57.03
  • 57.03
  • 55.71
  • 52.40
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
56.89
  • 56.89
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.37
  • 56.37
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000004168.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota6 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000004168.

Cross-references

EnsemblENSRNOG00000004168 (Slc35e4)
RGD708484 (Slc35e4)
EMBLAABR07015889, BC085693
Uniprot/SPTREMBLA0A0G2JTE6, A0A0G2JTE6_RAT
Uniprot/SWISSPROTQ5RKL7, S35E4_RAT

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