R. norvegicus Gene: Ascl1 - ENSRNOG00000004294 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000004294
NameAscl1
Descriptionachaete-scute family bHLH transcription factor 1 [Source:RGD Symbol;Acc:71010]
OrganismRattus norvegicus (rat)
Synonym(s)ash1, mash-1, mash1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.28e3
  • 7.28e3
  • 1.28e4
73.47
  • 73.47
  • 53.46
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
62.43
  • 62.43
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
  • 1.30e4
53.78
  • 53.78
  • 52.61
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
45.80
  • 45.80
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.62e4
  • 1.62e4
40.79
  • 40.79
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.73e4
  • 1.73e4
36.96
  • 36.96
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.74e4
  • 1.74e4
36.62
  • 36.62
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.77e4
  • 1.77e4
35.29
  • 35.29
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.94e4
  • 1.94e4
29.18
  • 29.18
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.96e4
  • 1.96e4
28.52
  • 28.52
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
2.12e4
  • 2.12e4
22.66
  • 22.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLX53725
EnsemblENSRNOG00000004294 (Ascl1)
RGD71010 (Ascl1)
Uniprot/SWISSPROTASCL1_RAT, P19359

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