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R. norvegicus Gene: Lrriq1 - ENSRNOG00000004564 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000004564
NameLrriq1
Descriptionleucine-rich repeats and IQ motif containing 1 [Source:RGD Symbol;Acc:1564903]
OrganismRattus norvegicus (rat)
Synonym(s)loc299759, rgd1564903
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.83e3
  • 5.83e3
  • 8.33e3
78.77
  • 78.77
  • 69.65
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.84e3
  • 9.84e3
  • 1.64e4
64.16
  • 64.16
  • 40.33
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
51.53
  • 51.53
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
  • 1.69e4
42.93
  • 42.93
  • 38.34
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.72e4
  • 1.72e4
37.44
  • 37.44
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.78e4
  • 1.78e4
35.26
  • 35.26
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
1.79e4
  • 1.79e4
34.72
  • 34.72
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Rodentia1 species1 geneCompare expression
Glires2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000004564.

Cross-references

EnsemblENSRNOG00000004564 (Lrriq1)
RGD1564903 (Lrriq1)
EMBLAABR07056884, AABR07056885, AABR07056886
Uniprot/SPTREMBLM0RDZ6, M0RDZ6_RAT

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