R. norvegicus Gene: Esf1 - ENSRNOG00000004777 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000004777
NameEsf1
DescriptionESF1 nucleolar pre-rRNA processing protein homolog [Source:RGD Symbol;Acc:1306067]
OrganismRattus norvegicus (rat)
Synonym(s)abtap, loc366203, rgd1306067

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.27e3
  • 2.27e3
  • 8.06e3
91.73
  • 91.73
  • 70.62
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.02e3
  • 4.02e3
  • 8.39e3
85.36
  • 85.36
  • 69.41
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
4.52e3
  • 4.52e3
83.52
  • 83.52
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
4.71e3
  • 4.71e3
82.82
  • 82.82
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
4.94e3
  • 4.94e3
81.99
  • 81.99
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
5.04e3
  • 5.04e3
81.62
  • 81.62
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
5.53e3
  • 5.53e3
79.83
  • 79.83
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.88e3
  • 5.88e3
78.55
  • 78.55
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
5.98e3
  • 5.98e3
78.20
  • 78.20
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
6.01e3
  • 6.01e3
78.10
  • 78.10
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.17e3
  • 6.17e3
77.50
  • 77.50
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.35e3
  • 6.35e3
  • 9.72e3
76.86
  • 76.86
  • 64.57
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
6.46e3
  • 6.46e3
76.43
  • 76.43
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
6.72e3
  • 6.72e3
75.51
  • 75.51
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
6.87e3
  • 6.87e3
74.95
  • 74.95
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
6.88e3
  • 6.88e3
  • 9.29e3
74.91
  • 74.91
  • 66.14
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
7.23e3
  • 7.23e3
73.64
  • 73.64
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
7.48e3
  • 7.48e3
72.73
  • 72.73
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
7.85e3
  • 7.85e3
71.38
  • 71.38
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
7.96e3
  • 7.96e3
70.97
  • 70.97
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
8.04e3
  • 8.04e3
70.68
  • 70.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAB038233
EnsemblENSRNOG00000004777 (Esf1)
RGD1306067 (Esf1)
Uniprot/SWISSPROTESF1_RAT, Q76MT4

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