R. norvegicus Gene: Slc4a10 - ENSRNOG00000005307 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000005307
NameSlc4a10
Descriptionsolute carrier family 4, sodium bicarbonate transporter, member 10 [Source:RGD Symbol;Acc:631407]
OrganismRattus norvegicus (rat)
Synonym(s)j7fmv4, j7fpf5, j7fri2, ncbe, slc4a10
Orthologs(s)26 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.34e3
  • 1.34e3
  • 1.45e3
95.11
  • 95.11
  • 94.72
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.36e3
  • 1.36e3
  • 2.16e3
95.06
  • 95.06
  • 92.15
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
3.03e3
  • 3.03e3
88.97
  • 88.97
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
  • 1.71e4
48.07
  • 48.07
  • 37.88
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.45e4
  • 1.45e4
47.09
  • 47.09
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.50e4
  • 1.50e4
45.33
  • 45.33
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.54e4
  • 1.54e4
43.89
  • 43.89
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.60e4
  • 1.60e4
41.81
  • 41.81
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
39.20
  • 39.20
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.77e4
  • 1.77e4
35.55
  • 35.55
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.77e4
  • 1.77e4
35.35
  • 35.35
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.80e4
  • 1.80e4
34.31
  • 34.31
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.82e4
  • 1.82e4
33.60
  • 33.60
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.84e4
  • 1.84e4
  • 2.08e4
33.00
  • 33.00
  • 24.10
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.87e4
  • 1.87e4
31.93
  • 31.93
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.96e4
  • 1.96e4
28.50
  • 28.50
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression
Bilateria25 species26 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000005307.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression
Bilateria4 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000005307.

Cross-references

EnsemblENSRNOG00000005307 (Slc4a10)
RGD631407 (Slc4a10)
EMBLAABR07052345, AABR07052346, AABR07052347, JX073715, JX073716, JX073718, KF736947, KF736949
Uniprot/SPTREMBLA0A0G2JYF0, A0A0G2JYF0_RAT, D3ZGB5, D3ZGB5_RAT, D3ZY00, D3ZY00_RAT, D4AD03, D4AD03_RAT, D4ADV4, D4ADV4_RAT, W0NT44, W0NT44_RAT, W0NXI0, W0NXI0_RAT, Z4YP24, Z4YP24_RAT

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