R. norvegicus Gene: Sertad2 - ENSRNOG00000005393 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000005393
NameSertad2
DescriptionSERTA domain containing 2 [Source:RGD Symbol;Acc:1564049]
OrganismRattus norvegicus (rat)
Orthologs(s)13 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.80e3
  • 2.80e3
  • 3.35e3
89.79
  • 89.79
  • 87.80
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
7.41e3
  • 7.41e3
73.03
  • 73.03
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
7.77e3
  • 7.77e3
71.71
  • 71.71
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
7.87e3
  • 7.87e3
71.32
  • 71.32
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
7.94e3
  • 7.94e3
71.09
  • 71.09
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
7.97e3
  • 7.97e3
70.98
  • 70.98
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
8.02e3
  • 8.02e3
70.78
  • 70.78
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
8.32e3
  • 8.32e3
69.70
  • 69.70
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
8.39e3
  • 8.39e3
  • 8.51e3
  • 1.62e4
69.45
  • 69.45
  • 68.99
  • 40.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
8.51e3
  • 8.51e3
69.00
  • 69.00
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
8.56e3
  • 8.56e3
68.83
  • 68.83
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
8.71e3
  • 8.71e3
68.27
  • 68.27
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
8.72e3
  • 8.72e3
  • 8.89e3
68.25
  • 68.25
  • 67.60
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
8.84e3
  • 8.84e3
67.80
  • 67.80
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
9.03e3
  • 9.03e3
67.12
  • 67.12
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
9.03e3
  • 9.03e3
67.11
  • 67.11
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.94e3
  • 9.94e3
  • 1.10e4
63.81
  • 63.81
  • 59.76
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
62.39
  • 62.39
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
59.69
  • 59.69
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.45e4
  • 1.45e4
47.33
  • 47.33
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria8 species8 genesCompare expression
Mammalia9 species9 genesCompare expression
Amniota11 species11 genesCompare expression
Tetrapoda12 species12 genesCompare expression
Euteleostomi13 species13 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000005393.

Cross-references

EnsemblENSRNOG00000005393 (Sertad2)
RGD1564049 (Sertad2)
EMBLAABR07016575, AABR07016576, AABR07016577
Uniprot/SPTREMBLF7F8X3, F7F8X3_RAT

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