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R. norvegicus Gene: Hacd4 - ENSRNOG00000005772 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000005772
NameHacd4
Description3-hydroxyacyl-CoA dehydratase 4 [Source:RGD Symbol;Acc:1310339]
OrganismRattus norvegicus (rat)
Synonym(s)loc362540, ptplad2, ptplad2_predictedgn, rgd1310339
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
7.93e3
  • 7.93e3
71.11
  • 71.11
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
8.57e3
  • 8.57e3
68.77
  • 68.77
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.00e4
  • 1.00e4
63.44
  • 63.44
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
62.62
  • 62.62
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
60.33
  • 60.33
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
59.43
  • 59.43
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
59.06
  • 59.06
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
59.03
  • 59.03
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
  • 1.31e4
  • 1.37e4
58.27
  • 58.27
  • 52.46
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
56.00
  • 56.00
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
55.97
  • 55.97
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.23e4
  • 1.23e4
55.08
  • 55.08
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
54.99
  • 54.99
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
54.47
  • 54.47
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
54.27
  • 54.27
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
53.99
  • 53.99
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
53.40
  • 53.40
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
51.15
  • 51.15
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
  • 1.61e4
46.34
  • 46.34
  • 41.43
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.90e4
  • 1.90e4
  • 2.26e4
30.69
  • 30.69
  • 17.63
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000005772.

Cross-references

EnsemblENSRNOG00000005772 (Hacd4)
RGD1310339 (Hacd4)
EMBLAABR07049120, CH474094
Uniprot/SPTREMBLD3Z8V6, D3Z8V6_RAT

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