R. norvegicus Gene: Kcnma1 - ENSRNOG00000005985 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000005985
NameKcnma1
Descriptionpotassium channel, calcium activated large conductance subfamily M alpha, member 1 [Source:RGD Symbol;Acc:620715]
OrganismRattus norvegicus (rat)
Synonym(s)bkca, bkca alpha, k(vca)alpha, kca1.1, kcnma, kcnma1b, kcnma1c, loc498438, slo, slo-alpha, slo1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.36e3
  • 1.36e3
  • 5.01e3
95.04687
  • 95.04687
  • 81.71740
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.00e3
  • 4.00e3
  • 6.35e3
85.41015
  • 85.41015
  • 76.85038
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.34e3
  • 7.34e3
  • 1.52e4
73.23923
  • 73.23923
  • 44.65897
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
7.47e3
  • 7.47e3
72.73961
  • 72.73961
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
8.18e3
  • 8.18e3
70.15075
  • 70.15075
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
8.56e3
  • 8.56e3
68.77281
  • 68.77281
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
9.48e3
  • 9.48e3
65.42361
  • 65.42361
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
62.74352
  • 62.74352
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
61.67699
  • 61.67699
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
60.06740
  • 60.06740
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
56.98530
  • 56.98530
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
55.73754
  • 55.73754
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.38e4
  • 1.38e4
49.56414
  • 49.56414
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.50e4
  • 1.50e4
45.37101
  • 45.37101
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.55e4
  • 1.55e4
43.62217
  • 43.62217
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.58e4
  • 1.58e4
42.40438
  • 42.40438
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.61e4
  • 1.61e4
41.39548
  • 41.39548
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.65e4
  • 1.65e4
  • 1.67e4
39.65106
  • 39.65106
  • 39.17128
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.75e4
  • 1.75e4
36.34953
  • 36.34953
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.76e4
  • 1.76e4
35.80946
  • 35.80946
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.79e4
  • 1.79e4
34.60338
  • 34.60338
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.80e4
  • 1.80e4
34.39351
  • 34.39351
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

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