R. norvegicus Gene: Stx18 - ENSRNOG00000006139 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000006139
NameStx18
Descriptionsyntaxin 18 [Source:RGD Symbol;Acc:1310058]
OrganismRattus norvegicus (rat)
Synonym(s)loc360953

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
856
  • 856
  • 1.51e3
96.88150
  • 96.88150
  • 94.49922
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.06e3
  • 2.06e3
  • 4.89e3
92.50465
  • 92.50465
  • 82.18226
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.54e3
  • 2.54e3
90.73465
  • 90.73465
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.96e3
  • 2.96e3
89.21403
  • 89.21403
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
3.30e3
  • 3.30e3
  • 3.58e3
87.97987
  • 87.97987
  • 86.94204
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
3.37e3
  • 3.37e3
87.70004
  • 87.70004
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
3.40e3
  • 3.40e3
87.61097
  • 87.61097
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
3.56e3
  • 3.56e3
87.01802
  • 87.01802
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
3.81e3
  • 3.81e3
86.11460
  • 86.11460
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
3.96e3
  • 3.96e3
85.56097
  • 85.56097
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.07e3
  • 4.07e3
  • 4.78e3
85.15622
  • 85.15622
  • 82.57855
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
4.17e3
  • 4.17e3
84.79907
  • 84.79907
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
4.22e3
  • 4.22e3
84.59715
  • 84.59715
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
4.28e3
  • 4.28e3
84.39764
  • 84.39764
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
4.34e3
  • 4.34e3
84.18350
  • 84.18350
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
4.38e3
  • 4.38e3
84.02593
  • 84.02593
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.72e3
  • 4.72e3
82.79097
  • 82.79097
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
5.11e3
  • 5.11e3
81.36941
  • 81.36941
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
5.34e3
  • 5.34e3
80.52449
  • 80.52449
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
5.60e3
  • 5.60e3
79.58763
  • 79.58763
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
5.92e3
  • 5.92e3
78.41095
  • 78.41095
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
  • 1.06e4
61.47317
  • 61.47317
  • 61.24532
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLBC079183
EnsemblENSRNOG00000006139 (Stx18)
RGD1310058 (Stx18)
Uniprot/SWISSPROTQ68FW4, STX18_RAT

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