R. norvegicus Gene: Tbc1d10a - ENSRNOG00000006394 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000006394
NameTbc1d10a
DescriptionTBC1 domain family, member 10a [Source:RGD Symbol;Acc:1311641]
OrganismRattus norvegicus (rat)
Synonym(s)loc360968, mgc105611, rabgap(po), tbc1d10
Orthologs(s)11 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.47e3
  • 2.47e3
91.02
  • 91.02
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
3.40e3
  • 3.40e3
87.61
  • 87.61
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
3.44e3
  • 3.44e3
87.46
  • 87.46
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
4.39e3
  • 4.39e3
84.02
  • 84.02
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
5.49e3
  • 5.49e3
80.02
  • 80.02
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
5.84e3
  • 5.84e3
78.74
  • 78.74
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
5.89e3
  • 5.89e3
78.53
  • 78.53
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
6.03e3
  • 6.03e3
78.05
  • 78.05
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.12e3
  • 6.12e3
  • 2.26e4
77.70
  • 77.70
  • 17.63
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
6.26e3
  • 6.26e3
77.20
  • 77.20
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.41e3
  • 6.41e3
76.66
  • 76.66
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
6.52e3
  • 6.52e3
76.23
  • 76.23
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.84e3
  • 6.84e3
75.07
  • 75.07
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
6.92e3
  • 6.92e3
74.81
  • 74.81
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
7.07e3
  • 7.07e3
  • 7.60e3
  • 7.86e3
74.25
  • 74.25
  • 72.31
  • 71.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.12e3
  • 7.12e3
  • 7.13e3
74.06
  • 74.06
  • 74.02
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
7.52e3
  • 7.52e3
72.61
  • 72.61
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
7.54e3
  • 7.54e3
72.52
  • 72.52
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
8.46e3
  • 8.46e3
69.20
  • 69.20
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
  • 1.41e4
49.03
  • 49.03
  • 48.70
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Boreoeutheria9 species9 genesCompare expression
Tetrapoda10 species10 genesCompare expression
Euteleostomi11 species11 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000006394.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eumetazoa1 geneCompare expression

Paralogy information comes from OMA : ENSRNOG00000006394.

Cross-references

EnsemblENSRNOG00000006394 (Tbc1d10a)
RGD1311641 (Tbc1d10a)
EMBLAB210856, AC119662, BC093603, CH473963
Uniprot/SPTREMBLQ587K3, Q587K3_RAT

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