R. norvegicus Gene: Syt1 - ENSRNOG00000006426 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000006426
NameSyt1
Descriptionsynaptotagmin I [Source:RGD Symbol;Acc:3803]
OrganismRattus norvegicus (rat)
Synonym(s)p65, q3s2e6, q707p5, syti

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
105
  • 105
  • 159
99.62
  • 99.62
  • 99.42
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
715
  • 715
97.40
  • 97.40
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
793
  • 793
  • 895
97.11
  • 97.11
  • 96.74
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
63.32
  • 63.32
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
61.70
  • 61.70
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
  • 1.11e4
59.74
  • 59.74
  • 59.48
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
58.79
  • 58.79
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
58.12
  • 58.12
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.29e4
  • 1.29e4
52.84
  • 52.84
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
51.10
  • 51.10
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
50.92
  • 50.92
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
50.81
  • 50.81
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.50e4
  • 1.50e4
45.21
  • 45.21
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.56e4
  • 1.56e4
42.93
  • 42.93
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.61e4
  • 1.61e4
41.13
  • 41.13
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.62e4
  • 1.62e4
40.89
  • 40.89
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.64e4
  • 1.64e4
40.11
  • 40.11
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.75e4
  • 1.75e4
36.13
  • 36.13
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.95e4
  • 1.95e4
28.97
  • 28.97
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.10e4
  • 2.10e4
23.51
  • 23.51
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAJ617615, DQ181550, X52772
EnsemblENSRNOG00000006426 (Syt1)
RGD3803 (Syt1)
Uniprot/SWISSPROTP21707, SYT1_RAT

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