R. norvegicus Gene: Snf8 - ENSRNOG00000006500 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000006500
NameSnf8
DescriptionSNF8, ESCRT-II complex subunit [Source:RGD Symbol;Acc:1310144]
OrganismRattus norvegicus (rat)
Synonym(s)d11moh34, eap30, loc287645, mgc105799, rgd1310144

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
650
  • 650
  • 1.47e3
97.63286
  • 97.63286
  • 94.64664
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
660
  • 660
97.59551
  • 97.59551
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
802
  • 802
97.07769
  • 97.07769
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
846
  • 846
96.91852
  • 96.91852
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
923
  • 923
  • 1.50e3
96.63687
  • 96.63687
  • 94.53310
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.11e3
  • 1.11e3
95.94948
  • 95.94948
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.12e3
  • 1.12e3
95.90225
  • 95.90225
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.14e3
  • 1.14e3
95.85823
  • 95.85823
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.15e3
  • 1.15e3
95.82562
  • 95.82562
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.19e3
  • 1.19e3
95.65131
  • 95.65131
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.23e3
  • 1.23e3
95.50151
  • 95.50151
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.25e3
  • 1.25e3
  • 1.25e3
95.45377
  • 95.45377
  • 95.43455
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.26e3
  • 1.26e3
  • 2.51e3
95.41525
  • 95.41525
  • 90.86414
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.28e3
  • 1.28e3
95.34475
  • 95.34475
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.35e3
  • 1.35e3
95.07718
  • 95.07718
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.35e3
  • 1.35e3
95.07382
  • 95.07382
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.50e3
  • 1.50e3
94.52529
  • 94.52529
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.58e3
  • 1.58e3
94.24715
  • 94.24715
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.64e3
  • 1.64e3
94.02115
  • 94.02115
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.82e3
  • 1.82e3
93.37721
  • 93.37721
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.86e3
  • 1.86e3
93.22705
  • 93.22705
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
5.48e3
  • 5.48e3
  • 5.53e3
80.03228
  • 80.03228
  • 79.81986
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLBC086364
EnsemblENSRNOG00000006500 (Snf8)
RGD1310144 (Snf8)
Uniprot/SWISSPROTQ5RK19, SNF8_RAT

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