R. norvegicus Gene: Plekhg3 - ENSRNOG00000006570 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000006570
NamePlekhg3
Descriptionpleckstrin homology domain containing, family G (with RhoGef domain) member 3 [Source:RGD Symbol;Acc:1308089]
OrganismRattus norvegicus (rat)
Synonym(s)loc314249, rgd1308089
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
4.60e3
  • 4.60e3
83.26
  • 83.26
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.78e3
  • 5.78e3
  • 1.16e4
78.93
  • 78.93
  • 57.70
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.84e3
  • 5.84e3
  • 7.63e3
78.73
  • 78.73
  • 72.20
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
6.55e3
  • 6.55e3
  • 6.73e3
76.15
  • 76.15
  • 75.49
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
6.67e3
  • 6.67e3
75.70
  • 75.70
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
7.14e3
  • 7.14e3
  • 7.32e3
  • 7.36e3
73.98
  • 73.98
  • 73.33
  • 73.18
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
7.91e3
  • 7.91e3
71.17
  • 71.17
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
8.59e3
  • 8.59e3
68.71
  • 68.71
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
9.09e3
  • 9.09e3
66.90
  • 66.90
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
9.13e3
  • 9.13e3
66.75
  • 66.75
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
9.37e3
  • 9.37e3
65.88
  • 65.88
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
9.57e3
  • 9.57e3
65.15
  • 65.15
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
9.70e3
  • 9.70e3
64.66
  • 64.66
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
9.94e3
  • 9.94e3
63.79
  • 63.79
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
63.20
  • 63.20
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
62.58
  • 62.58
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
61.93
  • 61.93
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
61.16
  • 61.16
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
60.30
  • 60.30
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
56.83
  • 56.83
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.65e4
  • 1.65e4
  • 2.26e4
39.91
  • 39.91
  • 17.63
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000006570.

Cross-references

EnsemblENSRNOG00000006570 (Plekhg3)
RGD1308089 (Plekhg3)
EMBLAABR07064894
Uniprot/SPTREMBLD3ZA21, D3ZA21_RAT

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