R. norvegicus Gene: Rbck1 - ENSRNOG00000006695 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000006695
NameRbck1
DescriptionRanBP-type and C3HC4-type zinc finger containing 1 [Source:RGD Symbol;Acc:708404]
OrganismRattus norvegicus (rat)
Synonym(s)hoil-1, loc60383, pkcbpb15
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
959
  • 959
96.51
  • 96.51
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.29e3
  • 1.29e3
95.32
  • 95.32
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.19e3
  • 2.19e3
92.01
  • 92.01
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
2.51e3
  • 2.51e3
90.86
  • 90.86
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.56e3
  • 2.56e3
90.66
  • 90.66
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
2.59e3
  • 2.59e3
90.58
  • 90.58
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.68e3
  • 2.68e3
90.24
  • 90.24
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.78e3
  • 2.78e3
89.89
  • 89.89
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
2.89e3
  • 2.89e3
  • 3.35e3
  • 3.90e3
89.48
  • 89.48
  • 87.79
  • 85.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
2.93e3
  • 2.93e3
89.32
  • 89.32
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.97e3
  • 2.97e3
  • 4.15e3
89.18
  • 89.18
  • 84.89
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.34e3
  • 3.34e3
  • 3.77e3
87.82
  • 87.82
  • 86.27
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
3.35e3
  • 3.35e3
87.79
  • 87.79
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
3.35e3
  • 3.35e3
87.79
  • 87.79
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
3.53e3
  • 3.53e3
87.14
  • 87.14
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
3.68e3
  • 3.68e3
86.58
  • 86.58
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
3.93e3
  • 3.93e3
85.69
  • 85.69
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
4.12e3
  • 4.12e3
84.98
  • 84.98
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
4.18e3
  • 4.18e3
84.77
  • 84.77
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.88e3
  • 5.88e3
  • 6.12e3
78.59
  • 78.59
  • 77.72
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.07e4
  • 1.07e4
  • 1.09e4
61.10
  • 61.10
  • 60.39
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000006695.

Cross-references

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