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R. norvegicus Gene: Ddit3 - ENSRNOG00000006789 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000006789
NameDdit3
DescriptionDNA-damage inducible transcript 3 [Source:RGD Symbol;Acc:62391]
OrganismRattus norvegicus (rat)
Synonym(s)c/ebp zeta, chop, chop-10, chop10, ddit-3, gadd153, mgc124604
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.01e3
  • 1.01e3
  • 4.29e3
96.33
  • 96.33
  • 84.38
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.11e3
  • 1.11e3
  • 3.04e3
95.96
  • 95.96
  • 88.94
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.87e3
  • 1.87e3
93.18
  • 93.18
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
2.38e3
  • 2.38e3
  • 4.78e3
  • 5.20e3
91.34
  • 91.34
  • 82.60
  • 81.05
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
2.51e3
  • 2.51e3
90.87
  • 90.87
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.03e3
  • 3.03e3
88.98
  • 88.98
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.26e3
  • 3.26e3
  • 4.43e3
88.14
  • 88.14
  • 83.87
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
3.37e3
  • 3.37e3
87.72
  • 87.72
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
3.78e3
  • 3.78e3
86.25
  • 86.25
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
3.86e3
  • 3.86e3
85.95
  • 85.95
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
3.91e3
  • 3.91e3
85.76
  • 85.76
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
4.02e3
  • 4.02e3
85.36
  • 85.36
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
4.06e3
  • 4.06e3
85.21
  • 85.21
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.40e3
  • 4.40e3
83.97
  • 83.97
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
4.47e3
  • 4.47e3
83.72
  • 83.72
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
4.61e3
  • 4.61e3
83.21
  • 83.21
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
4.76e3
  • 4.76e3
82.66
  • 82.66
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
4.77e3
  • 4.77e3
82.64
  • 82.64
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
5.33e3
  • 5.33e3
80.58
  • 80.58
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
5.38e3
  • 5.38e3
80.41
  • 80.41
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
5.41e3
  • 5.41e3
80.29
  • 80.29
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
9.24e3
  • 9.24e3
  • 9.30e3
66.34
  • 66.34
  • 66.14
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000006789.

Cross-references

EnsemblENSRNOG00000006789 (Ddit3)
RGD62391 (Ddit3)
EMBLAC114111, BC100664, CH473950
Uniprot/SPTREMBLQ496Y7, Q496Y7_RAT

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