We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

R. norvegicus Gene: Ly6h - ENSRNOG00000007334 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000007334
NameLy6h
Descriptionlymphocyte antigen 6 complex, locus H [Source:RGD Symbol;Acc:1311896]
OrganismRattus norvegicus (rat)
Synonym(s)loc300025, ly6h_predicted
Orthologs(s)15 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
149
  • 149
  • 430
99.46
  • 99.46
  • 98.44
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
384
  • 384
  • 404
98.61
  • 98.61
  • 98.53
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
3.34e3
  • 3.34e3
87.83
  • 87.83
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
4.66e3
  • 4.66e3
  • 5.06e3
83.01
  • 83.01
  • 81.56
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
  • 1.94e4
62.48
  • 62.48
  • 29.42
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
58.60
  • 58.60
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
54.01
  • 54.01
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
52.06
  • 52.06
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
51.36
  • 51.36
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.38e4
  • 1.38e4
49.90
  • 49.90
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.39e4
  • 1.39e4
49.22
  • 49.22
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
48.56
  • 48.56
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.45e4
  • 1.45e4
47.36
  • 47.36
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
39.29
  • 39.29
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.76e4
  • 1.76e4
36.06
  • 36.06
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.78e4
  • 1.78e4
35.16
  • 35.16
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.83e4
  • 1.83e4
33.47
  • 33.47
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.88e4
  • 1.88e4
31.44
  • 31.44
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.09e4
  • 2.09e4
23.85
  • 23.85
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
2.10e4
  • 2.10e4
23.37
  • 23.37
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria11 species13 genesCompare expression
Theria12 species15 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000007334.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Theria3 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000007334.

Cross-references

Do not show this banner again