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R. norvegicus Gene: Sept4 - ENSRNOG00000007367 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000007367
NameSept4
Descriptionseptin 4 [Source:RGD Symbol;Acc:1308781]
OrganismRattus norvegicus (rat)
Synonym(s)eg3-1rvc, eg3rvc, loc287606, mgc156532, pnutl2
Orthologs(s)23 orthologs
Paralog(s)11 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
93.1
  • 93.1
99.66
  • 99.66
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
339
  • 339
98.77
  • 98.77
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
544
  • 544
  • 617
98.02
  • 98.02
  • 97.76
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
868
  • 868
96.84
  • 96.84
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.04e3
  • 1.04e3
  • 1.22e3
96.21
  • 96.21
  • 95.54
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.49e3
  • 1.49e3
94.59
  • 94.59
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.64e3
  • 1.64e3
  • 1.72e3
94.04
  • 94.04
  • 93.73
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.82e3
  • 1.82e3
93.37
  • 93.37
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.94e3
  • 1.94e3
92.93
  • 92.93
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.52e3
  • 2.52e3
90.82
  • 90.82
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
2.63e3
  • 2.63e3
90.41
  • 90.41
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
3.45e3
  • 3.45e3
87.44
  • 87.44
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
3.60e3
  • 3.60e3
  • 4.27e3
  • 5.54e3
86.87
  • 86.87
  • 84.43
  • 79.84
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
3.92e3
  • 3.92e3
85.73
  • 85.73
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
3.95e3
  • 3.95e3
85.63
  • 85.63
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
4.04e3
  • 4.04e3
85.28
  • 85.28
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
4.26e3
  • 4.26e3
84.50
  • 84.50
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
4.52e3
  • 4.52e3
83.54
  • 83.54
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.72e3
  • 4.72e3
82.82
  • 82.82
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
5.11e3
  • 5.11e3
81.39
  • 81.39
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
8.24e3
  • 8.24e3
70.00
  • 70.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria22 species23 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000007367.

Paralogs (same species)

Paralogy information comes from OMA : ENSRNOG00000007367.

Cross-references

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