R. norvegicus Gene: Top1mt - ENSRNOG00000007500 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000007500
NameTop1mt
Descriptiontopoisomerase (DNA) I, mitochondrial [Source:RGD Symbol;Acc:1303177]
OrganismRattus norvegicus (rat)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.76e3
  • 3.76e3
  • 4.37e3
86.29
  • 86.29
  • 84.08
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
5.24e3
  • 5.24e3
  • 5.36e3
80.91
  • 80.91
  • 80.45
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
6.58e3
  • 6.58e3
75.99
  • 75.99
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.24e3
  • 7.24e3
  • 8.60e3
73.61
  • 73.61
  • 68.62
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
7.36e3
  • 7.36e3
73.17
  • 73.17
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
8.03e3
  • 8.03e3
70.73
  • 70.73
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.26e3
  • 8.26e3
  • 8.30e3
69.89
  • 69.89
  • 69.72
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
8.28e3
  • 8.28e3
69.80
  • 69.80
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
8.33e3
  • 8.33e3
69.62
  • 69.62
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
8.43e3
  • 8.43e3
69.26
  • 69.26
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
8.67e3
  • 8.67e3
68.38
  • 68.38
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
8.80e3
  • 8.80e3
67.91
  • 67.91
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
8.98e3
  • 8.98e3
67.27
  • 67.27
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
9.07e3
  • 9.07e3
66.92
  • 66.92
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
9.09e3
  • 9.09e3
66.84
  • 66.84
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
9.29e3
  • 9.29e3
66.13
  • 66.13
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
9.46e3
  • 9.46e3
65.49
  • 65.49
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
9.88e3
  • 9.88e3
63.96
  • 63.96
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
62.68
  • 62.68
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.04e4
  • 1.04e4
61.98
  • 61.98
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
60.48
  • 60.48
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAC133673, BK001786
EnsemblENSRNOG00000007500 (Top1mt)
RGD1303177 (Top1mt)
Uniprot/SPTREMBLA0A0G2JWV0, A0A0G2JWV0_RAT
Uniprot/SWISSPROTQ6IM78, TOP1M_RAT

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