R. norvegicus Gene: Sox12 - ENSRNOG00000007514 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000007514
NameSox12
DescriptionSRY (sex determining region Y)-box 12 [Source:RGD Symbol;Acc:1586313]
OrganismRattus norvegicus (rat)
Synonym(s)loc689988
Orthologs(s)7 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
7.32e3
  • 7.32e3
73.34
  • 73.34
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
7.55e3
  • 7.55e3
72.52
  • 72.52
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.70e3
  • 8.70e3
  • 1.06e4
68.32
  • 68.32
  • 61.44
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.40e3
  • 9.40e3
  • 2.21e4
65.75
  • 65.75
  • 19.54
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
62.95
  • 62.95
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
  • 2.26e4
60.51
  • 60.51
  • 17.63
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
60.45
  • 60.45
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
59.92
  • 59.92
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
57.36
  • 57.36
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
56.78
  • 56.78
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
56.48
  • 56.48
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.11
  • 56.11
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
55.81
  • 55.81
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.23e4
  • 1.23e4
55.19
  • 55.19
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
1.24e4
  • 1.24e4
  • 1.27e4
  • 1.35e4
54.81
  • 54.81
  • 53.72
  • 50.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
54.53
  • 54.53
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
54.12
  • 54.12
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
53.91
  • 53.91
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
53.38
  • 53.38
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.48e4
  • 1.48e4
46.02
  • 46.02
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSRNOG00000007514 (Sox12)
RGD1586313 (Sox12)
EMBLAABR07054324
Uniprot/SPTREMBLD3ZZ13, D3ZZ13_RAT

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