Gene: Stau1 - ENSRNOG00000007781 - Rattus norvegicus (rat)

General information

Ensembl ID	ENSRNOG00000007781
Name	Stau1
Description	staufen double-stranded RNA binding protein 1 [Source:RGD Symbol;Acc:621778]
Organism	Rattus norvegicus (rat)
Synonym(s)	mgc124588, stau
Orthologs(s)	18 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002107	liver	[+] 3 stages RnorDv:00000194-6-month-old stage (rat) UBERON:0000113post-juvenile adult stage UBERON:0034920infant stage	2.50e3 2.50e3 2.70e3 3.37e3	90.88 90.88 90.18 87.74	AEIR AEIR AEIR AEIR
UBERON:0000082	adult mammalian kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	2.83e3 2.83e3	89.69 89.69	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000113post-juvenile adult stage	3.10e3 3.10e3	88.72 88.72	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000113post-juvenile adult stage	3.15e3 3.15e3	88.54 88.54	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000113post-juvenile adult stage	3.25e3 3.25e3	88.18 88.18	AEIR AEIR
UBERON:0002037	cerebellum	[+] 1 stage UBERON:0000113post-juvenile adult stage	3.30e3 3.30e3	87.99 87.99	AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 1 stage UBERON:0000113post-juvenile adult stage	3.51e3 3.51e3	87.21 87.21	AEIR AEIR
UBERON:0001870	frontal cortex	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	3.71e3 3.71e3 4.39e3	86.49 86.49 84.03	AEIR AEIR AEIR
UBERON:0002115	jejunum	[+] 1 stage UBERON:0000113post-juvenile adult stage	3.77e3 3.77e3	86.26 86.26	AEIR AEIR
UBERON:0001155	colon	[+] 1 stage UBERON:0000113post-juvenile adult stage	3.87e3 3.87e3	85.92 85.92	AEIR AEIR
UBERON:0001043	esophagus	[+] 1 stage UBERON:0000113post-juvenile adult stage	3.97e3 3.97e3	85.54 85.54	AEIR AEIR
UBERON:0002116	ileum	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.01e3 4.01e3	85.40 85.40	AEIR AEIR
UBERON:0000945	stomach	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.05e3 4.05e3	85.25 85.25	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.22e3 4.22e3	84.65 84.65	AEIR AEIR
UBERON:0002114	duodenum	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.28e3 4.28e3	84.41 84.41	AEIR AEIR
UBERON:0001377	quadriceps femoris	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.36e3 4.36e3	84.10 84.10	AEIR AEIR
UBERON:0002370	thymus	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.38e3 4.38e3	84.05 84.05	AEIR AEIR
UBERON:0001264	pancreas	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.43e3 4.43e3	83.87 83.87	AEIR AEIR
UBERON:0001954	Ammon's horn	[+] 2 stages UBERON:0000113post-juvenile adult stage RnorDv:00000194-6-month-old stage (rat)	6.08e3 6.08e3 6.10e3	77.87 77.87 77.80	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	7.12e3 7.12e3 7.65e3	74.06 74.06 72.15	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

Affymetrix data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

Affymetrix data: GEO
RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Murinae	1 species Mus musculus (mouse)	1 gene ENSMUSG00000039536 Stau1	Compare expression	[+]
Rodentia	2 species Mus musculus (mouse) Cavia porcellus (guinea pig)	2 genes ENSMUSG00000039536 Stau1 ENSCPOG00000005566 STAU1	Compare expression	[+]
Glires	3 species Mus musculus (mouse) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig)	3 genes ENSMUSG00000039536 Stau1 ENSOCUG00000006214 STAU1 ENSCPOG00000005566 STAU1	Compare expression	[+]
Euarchontoglires	7 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Oryctolagus cuniculus (rabbit) Cavia porcellus (guinea pig)	7 genes ENSG00000124214 STAU1 ENSMUSG00000039536 Stau1 ENSPTRG00000023130 STAU1 ENSGGOG00000025351 STAU1 ENSMMUG00000002302 STAU1 ENSOCUG00000006214 STAU1 ENSCPOG00000005566 STAU1	Compare expression	[+]
Boreoeutheria	13 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog)	13 genes ENSG00000124214 STAU1 ENSMUSG00000039536 Stau1 ENSPTRG00000023130 STAU1 ENSGGOG00000025351 STAU1 ENSMMUG00000002302 STAU1 ENSBTAG00000000241 STAU1 ENSSSCG00000027444 STAU1 ENSECAG00000012894 STAU1 ENSOCUG00000006214 STAU1 ENSCAFG00000011347 STAU1 ENSFCAG00000001447 STAU1 ENSCPOG00000005566 STAU1 ENSEEUG00000014344 STAU1	Compare expression	[+]
Mammalia	14 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Ornithorhynchus anatinus (platypus)	14 genes ENSG00000124214 STAU1 ENSMUSG00000039536 Stau1 ENSPTRG00000023130 STAU1 ENSGGOG00000025351 STAU1 ENSMMUG00000002302 STAU1 ENSBTAG00000000241 STAU1 ENSSSCG00000027444 STAU1 ENSECAG00000012894 STAU1 ENSOCUG00000006214 STAU1 ENSCAFG00000011347 STAU1 ENSFCAG00000001447 STAU1 ENSCPOG00000005566 STAU1 ENSEEUG00000014344 STAU1 ENSOANG00000006394 STAU1	Compare expression	[+]
Amniota	16 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole)	16 genes ENSG00000124214 STAU1 ENSMUSG00000039536 Stau1 ENSPTRG00000023130 STAU1 ENSGGOG00000025351 STAU1 ENSMMUG00000002302 STAU1 ENSBTAG00000000241 STAU1 ENSSSCG00000027444 STAU1 ENSECAG00000012894 STAU1 ENSOCUG00000006214 STAU1 ENSCAFG00000011347 STAU1 ENSFCAG00000001447 STAU1 ENSCPOG00000005566 STAU1 ENSEEUG00000014344 STAU1 ENSOANG00000006394 STAU1 ENSGALG00000004736 STAU1 ENSACAG00000015909 STAU1	Compare expression	[+]
Tetrapoda	17 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	17 genes ENSG00000124214 STAU1 ENSMUSG00000039536 Stau1 ENSPTRG00000023130 STAU1 ENSGGOG00000025351 STAU1 ENSMMUG00000002302 STAU1 ENSBTAG00000000241 STAU1 ENSSSCG00000027444 STAU1 ENSECAG00000012894 STAU1 ENSOCUG00000006214 STAU1 ENSCAFG00000011347 STAU1 ENSFCAG00000001447 STAU1 ENSCPOG00000005566 STAU1 ENSEEUG00000014344 STAU1 ENSOANG00000006394 STAU1 ENSGALG00000004736 STAU1 ENSACAG00000015909 STAU1 ENSXETG00000001783 stau1	Compare expression	[+]
Euteleostomi	18 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	18 genes ENSG00000124214 STAU1 ENSMUSG00000039536 Stau1 ENSDARG00000044182 stau1 ENSPTRG00000023130 STAU1 ENSGGOG00000025351 STAU1 ENSMMUG00000002302 STAU1 ENSBTAG00000000241 STAU1 ENSSSCG00000027444 STAU1 ENSECAG00000012894 STAU1 ENSOCUG00000006214 STAU1 ENSCAFG00000011347 STAU1 ENSFCAG00000001447 STAU1 ENSCPOG00000005566 STAU1 ENSEEUG00000014344 STAU1 ENSOANG00000006394 STAU1 ENSGALG00000004736 STAU1 ENSACAG00000015909 STAU1 ENSXETG00000001783 stau1	Compare expression	[+]

Orthology information comes from OMA : ENSRNOG00000007781.

Cross-references

Ensembl	ENSRNOG00000007781 (Stau1)
RGD	621778 (Stau1)
EMBL	AC130053, AF227200
Uniprot/SPTREMBL	Q9ET50, Q9ET50_RAT