R. norvegicus Gene: Slc8a1 - ENSRNOG00000008479 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000008479
NameSlc8a1
Descriptionsolute carrier family 8 (sodium/calcium exchanger), member 1 [Source:RGD Symbol;Acc:3717]
OrganismRattus norvegicus (rat)
Synonym(s)ncx, ncx1, q924y2, q9qw49, q9r238, q9r239, q9wu29, q9wu30

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.38e3
  • 2.38e3
91.32
  • 91.32
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.76e3
  • 3.76e3
86.29
  • 86.29
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
3.97e3
  • 3.97e3
85.51
  • 85.51
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.21e3
  • 6.21e3
  • 1.16e4
77.36
  • 77.36
  • 57.82
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
6.46e3
  • 6.46e3
76.46
  • 76.46
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.98e3
  • 6.98e3
74.54
  • 74.54
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
7.46e3
  • 7.46e3
72.80
  • 72.80
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.62e3
  • 7.62e3
  • 9.15e3
72.22
  • 72.22
  • 66.62
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
7.78e3
  • 7.78e3
71.63
  • 71.63
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
7.81e3
  • 7.81e3
71.51
  • 71.51
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
9.38e3
  • 9.38e3
65.79
  • 65.79
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
9.39e3
  • 9.39e3
65.77
  • 65.77
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
9.49e3
  • 9.49e3
65.40
  • 65.40
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
9.55e3
  • 9.55e3
65.19
  • 65.19
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
63.30
  • 63.30
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
62.80
  • 62.80
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
60.16
  • 60.16
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
  • 2.26e4
54.25
  • 54.25
  • 17.63
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
54.23
  • 54.23
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
54.10
  • 54.10
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
1.27e4
  • 1.27e4
  • 1.35e4
53.76
  • 53.76
  • 50.70
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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