R. norvegicus Gene: Pdzd3 - ENSRNOG00000008526 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000008526
NamePdzd3
DescriptionPDZ domain containing 3 [Source:RGD Symbol;Acc:1559807]
OrganismRattus norvegicus (rat)
Synonym(s)loc500986, rgd1559807

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.67e3
  • 3.67e3
86.63183
  • 86.63183
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
3.72e3
  • 3.72e3
86.44637
  • 86.44637
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
4.12e3
  • 4.12e3
84.96159
  • 84.96159
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
4.38e3
  • 4.38e3
84.01477
  • 84.01477
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
7.52e3
  • 7.52e3
72.55838
  • 72.55838
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
59.79367
  • 59.79367
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
59.14170
  • 59.14170
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
58.32888
  • 58.32888
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
57.51815
  • 57.51815
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
  • 1.29e4
55.60619
  • 55.60619
  • 52.77616
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
52.47657
  • 52.47657
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
52.11839
  • 52.11839
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
51.76770
  • 51.76770
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.38e4
  • 1.38e4
49.70113
  • 49.70113
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.39e4
  • 1.39e4
49.16293
  • 49.16293
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
48.57238
  • 48.57238
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
48.22818
  • 48.22818
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.54e4
  • 1.54e4
43.86206
  • 43.86206
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.64e4
  • 1.64e4
40.31842
  • 40.31842
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAC112557
EnsemblENSRNOG00000008526 (Pdzd3)
RGD1559807 (Pdzd3)
Uniprot/SPTREMBLD4A7C5, D4A7C5_RAT

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