R. norvegicus Gene: Fbf1 - ENSRNOG00000008577 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000008577
NameFbf1
DescriptionFas (TNFRSF6) binding factor 1 [Source:RGD Symbol;Acc:1310662]
OrganismRattus norvegicus (rat)
Synonym(s)loc287836
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.37e3
  • 3.37e3
  • 7.65e3
87.74
  • 87.74
  • 72.15
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.37e3
  • 6.37e3
76.81
  • 76.81
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
6.41e3
  • 6.41e3
76.65
  • 76.65
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.84e3
  • 6.84e3
75.08
  • 75.08
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
6.94e3
  • 6.94e3
74.74
  • 74.74
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
7.23e3
  • 7.23e3
73.66
  • 73.66
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.57e3
  • 7.57e3
  • 8.31e3
72.43
  • 72.43
  • 69.73
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
7.76e3
  • 7.76e3
71.73
  • 71.73
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
7.85e3
  • 7.85e3
71.39
  • 71.39
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
7.99e3
  • 7.99e3
  • 8.69e3
  • 8.80e3
70.90
  • 70.90
  • 68.36
  • 67.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
8.28e3
  • 8.28e3
69.83
  • 69.83
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
8.30e3
  • 8.30e3
69.76
  • 69.76
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
8.33e3
  • 8.33e3
69.66
  • 69.66
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
8.48e3
  • 8.48e3
69.10
  • 69.10
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
8.57e3
  • 8.57e3
68.78
  • 68.78
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
8.88e3
  • 8.88e3
67.65
  • 67.65
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
9.33e3
  • 9.33e3
66.03
  • 66.03
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
9.35e3
  • 9.35e3
65.96
  • 65.96
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
9.50e3
  • 9.50e3
65.41
  • 65.41
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
9.93e3
  • 9.93e3
63.82
  • 63.82
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.29e4
  • 1.29e4
  • 1.29e4
52.95
  • 52.95
  • 52.83
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Euarchontoglires4 species4 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000008577.

Cross-references

EnsemblENSRNOG00000008577 (Fbf1)
RGD1310662 (Fbf1)
EMBLAC136482
Uniprot/SPTREMBLF1LSG3, F1LSG3_RAT

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