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R. norvegicus Gene: Orc1 - ENSRNOG00000008841 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000008841
NameOrc1
Descriptionorigin recognition complex, subunit 1 [Source:RGD Symbol;Acc:631435]
OrganismRattus norvegicus (rat)
Synonym(s)orc1l
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
8.28e3
  • 8.28e3
69.85
  • 69.85
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
59.97
  • 59.97
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
58.43
  • 58.43
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
58.19
  • 58.19
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
57.35
  • 57.35
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.34
  • 56.34
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
55.47
  • 55.47
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.38e4
  • 1.38e4
49.69
  • 49.69
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
  • 1.51e4
47.06
  • 47.06
  • 45.05
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.48e4
  • 1.48e4
46.14
  • 46.14
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
45.65
  • 45.65
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.50e4
  • 1.50e4
45.19
  • 45.19
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
  • 1.62e4
45.18
  • 45.18
  • 41.01
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.51e4
  • 1.51e4
45.12
  • 45.12
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.51e4
  • 1.51e4
44.98
  • 44.98
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
44.39
  • 44.39
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.58e4
  • 1.58e4
  • 1.70e4
42.28
  • 42.28
  • 37.93
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.60e4
  • 1.60e4
41.60
  • 41.60
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.64e4
  • 1.64e4
40.43
  • 40.43
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
39.99
  • 39.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000008841.

Cross-references

EnsemblENSRNOG00000008841 (Orc1)
RGD631435 (Orc1)
EMBLAABR07049553, CH474008
Uniprot/SPTREMBLG3V768, G3V768_RAT

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