R. norvegicus Gene: Gjb2 - ENSRNOG00000008855 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000008855
NameGjb2
Descriptiongap junction protein, beta 2 [Source:RGD Symbol;Acc:728891]
OrganismRattus norvegicus (rat)
Synonym(s)cx26, cxn-26, mgc93804
Orthologs(s)15 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.11e3
  • 1.11e3
95.96
  • 95.96
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.47e3
  • 1.47e3
94.65
  • 94.65
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.89e3
  • 1.89e3
93.11
  • 93.11
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
2.29e3
  • 2.29e3
  • 4.26e3
  • 4.80e3
91.66
  • 91.66
  • 84.49
  • 82.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.50e3
  • 2.50e3
90.89
  • 90.89
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
4.89e3
  • 4.89e3
82.17
  • 82.17
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
4.92e3
  • 4.92e3
82.09
  • 82.09
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
6.30e3
  • 6.30e3
77.06
  • 77.06
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
6.36e3
  • 6.36e3
76.85
  • 76.85
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.18e3
  • 7.18e3
  • 9.30e3
73.84
  • 73.84
  • 66.12
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
8.40e3
  • 8.40e3
69.41
  • 69.41
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
8.88e3
  • 8.88e3
67.64
  • 67.64
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
62.60
  • 62.60
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.39e4
  • 1.39e4
49.49
  • 49.49
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
47.84
  • 47.84
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
47.81
  • 47.81
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
47.55
  • 47.55
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
46.75
  • 46.75
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.47e4
  • 1.47e4
  • 1.49e4
46.38
  • 46.38
  • 45.61
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.75e4
  • 1.75e4
36.18
  • 36.18
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.96e4
  • 1.96e4
  • 2.26e4
28.77
  • 28.77
  • 17.63
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires6 species6 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000008855.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Sarcopterygii1 geneCompare expression
Chordata3 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000008855.

Cross-references

EnsemblENSRNOG00000008855 (Gjb2)
RGD728891 (Gjb2)
EMBLBC078952
Uniprot/SWISSPROTCXB2_RAT, P21994

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