R. norvegicus Gene: Nptn - ENSRNOG00000009029 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000009029
NameNptn
Descriptionneuroplastin [Source:RGD Symbol;Acc:620296]
OrganismRattus norvegicus (rat)
Synonym(s)gp55/65, p97547, q6ire8, sdfr1, sdr-1, sdr1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
169
  • 169
  • 363
99.38710
  • 99.38710
  • 98.67969
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
199
  • 199
99.27928
  • 99.27928
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
386
  • 386
  • 436
98.59667
  • 98.59667
  • 98.41368
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
721
  • 721
97.37378
  • 97.37378
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
787
  • 787
97.13327
  • 97.13327
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
796
  • 796
97.09921
  • 97.09921
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
842
  • 842
96.93230
  • 96.93230
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
904
  • 904
96.70657
  • 96.70657
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
912
  • 912
96.67724
  • 96.67724
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
969
  • 969
96.46967
  • 96.46967
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
999
  • 999
96.36102
  • 96.36102
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.02e3
  • 1.02e3
96.29241
  • 96.29241
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.13e3
  • 1.13e3
95.86811
  • 95.86811
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.27e3
  • 1.27e3
95.37148
  • 95.37148
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.34e3
  • 1.34e3
95.11887
  • 95.11887
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.50e3
  • 1.50e3
94.51472
  • 94.51472
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.77e3
  • 1.77e3
93.53244
  • 93.53244
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.85e3
  • 1.85e3
93.25754
  • 93.25754
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.94e3
  • 1.94e3
92.94427
  • 92.94427
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
2.36e3
  • 2.36e3
  • 2.70e3
91.37779
  • 91.37779
  • 90.14688
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.66e3
  • 7.66e3
  • 1.01e4
72.07014
  • 72.07014
  • 63.02659
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07070278, BC070947, X99337, X99338
EnsemblENSRNOG00000009029 (Nptn)
RGD620296 (Nptn)
Uniprot/SPTREMBLD3ZDF0, D3ZDF0_RAT
Uniprot/SWISSPROTNPTN_RAT, P97546

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