R. norvegicus Gene: Rc3h2 - ENSRNOG00000009196 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000009196
NameRc3h2
Descriptionring finger and CCCH-type domains 2 [Source:RGD Symbol;Acc:1304833]
OrganismRattus norvegicus (rat)
Synonym(s)loc311909, mnab, mnab_predicted
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
5.98e3
  • 5.98e3
78.23
  • 78.23
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
6.38e3
  • 6.38e3
76.76
  • 76.76
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.75e3
  • 6.75e3
  • 7.77e3
75.42
  • 75.42
  • 71.71
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
6.79e3
  • 6.79e3
75.28
  • 75.28
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.97e3
  • 6.97e3
74.63
  • 74.63
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
7.02e3
  • 7.02e3
74.43
  • 74.43
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.10e3
  • 7.10e3
  • 8.07e3
74.15
  • 74.15
  • 70.61
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
7.39e3
  • 7.39e3
73.08
  • 73.08
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.61e3
  • 7.61e3
  • 8.45e3
72.29
  • 72.29
  • 69.21
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
8.04e3
  • 8.04e3
70.71
  • 70.71
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
8.21e3
  • 8.21e3
70.10
  • 70.10
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
8.25e3
  • 8.25e3
69.95
  • 69.95
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
8.33e3
  • 8.33e3
69.66
  • 69.66
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0034920infant stage
8.73e3
  • 8.73e3
  • 9.56e3
  • 9.88e3
68.19
  • 68.19
  • 65.18
  • 64.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
8.85e3
  • 8.85e3
67.78
  • 67.78
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
9.12e3
  • 9.12e3
66.79
  • 66.79
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
9.22e3
  • 9.22e3
66.41
  • 66.41
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
9.29e3
  • 9.29e3
66.16
  • 66.16
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
9.49e3
  • 9.49e3
65.43
  • 65.43
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
49.04
  • 49.04
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000009196.

Cross-references

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