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R. norvegicus Gene: LOC690096 - ENSRNOG00000009240 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000009240
NameLOC690096
Descriptionsimilar to ribosomal protein L28 [Source:RGD Symbol;Acc:1585117]
OrganismRattus norvegicus (rat)
Orthologs(s)11 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
49.18
  • 49.18
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
44.22
  • 44.22
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
40.02
  • 40.02
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.73e4
  • 1.73e4
37.03
  • 37.03
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.75e4
  • 1.75e4
36.43
  • 36.43
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.76e4
  • 1.76e4
35.89
  • 35.89
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.82e4
  • 1.82e4
  • 2.26e4
33.85
  • 33.85
  • 17.63
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.85e4
  • 1.85e4
32.75
  • 32.75
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.86e4
  • 1.86e4
32.26
  • 32.26
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.91e4
  • 1.91e4
30.47
  • 30.47
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.95e4
  • 1.95e4
29.03
  • 29.03
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.01e4
  • 2.01e4
  • 2.04e4
26.90
  • 26.90
  • 25.67
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.01e4
  • 2.01e4
26.72
  • 26.72
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
2.05e4
  • 2.05e4
  • 2.11e4
25.49
  • 25.49
  • 23.16
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.05e4
  • 2.05e4
25.47
  • 25.47
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
2.10e4
  • 2.10e4
23.36
  • 23.36
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
2.14e4
  • 2.14e4
21.94
  • 21.94
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.21e4
  • 2.21e4
19.54
  • 19.54
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eutheria2 genesCompare expression
Tetrapoda3 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000009240.

Cross-references

EnsemblENSRNOG00000009240 (LOC690096)
RGD1585117 (LOC690096)
EMBLAABR07016623
Uniprot/SPTREMBLD3ZEI0, D3ZEI0_RAT

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