R. norvegicus Gene: Schip1 - ENSRNOG00000009276 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000009276
NameSchip1
Descriptionschwannomin interacting protein 1 [Source:RGD Symbol;Acc:1309962]
OrganismRattus norvegicus (rat)
Synonym(s)loc295105
Orthologs(s)11 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
677
  • 677
  • 768
97.54
  • 97.54
  • 97.21
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
727
  • 727
97.36
  • 97.36
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
808
  • 808
97.06
  • 97.06
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
812
  • 812
97.05
  • 97.05
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
843
  • 843
96.93
  • 96.93
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
866
  • 866
  • 1.60e3
96.85
  • 96.85
  • 94.19
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.46e3
  • 2.46e3
91.04
  • 91.04
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
2.85e3
  • 2.85e3
89.62
  • 89.62
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.75e3
  • 6.75e3
75.42
  • 75.42
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
7.69e3
  • 7.69e3
72.01
  • 72.01
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
8.43e3
  • 8.43e3
69.30
  • 69.30
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
8.55e3
  • 8.55e3
68.84
  • 68.84
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
8.91e3
  • 8.91e3
67.55
  • 67.55
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
9.25e3
  • 9.25e3
66.32
  • 66.32
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
9.42e3
  • 9.42e3
65.70
  • 65.70
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
9.79e3
  • 9.79e3
64.35
  • 64.35
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
9.87e3
  • 9.87e3
64.05
  • 64.05
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
61.08
  • 61.08
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
  • 2.26e4
55.48
  • 55.48
  • 17.63
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
1.24e4
  • 1.24e4
  • 1.30e4
  • 1.38e4
54.70
  • 54.70
  • 52.59
  • 49.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
53.54
  • 53.54
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Glires2 species2 genesCompare expression
Euarchontoglires3 species3 genesCompare expression
Boreoeutheria6 species6 genesCompare expression
Theria7 species7 genesCompare expression
Mammalia8 species8 genesCompare expression
Amniota9 species9 genesCompare expression
Tetrapoda10 species10 genesCompare expression
Euteleostomi11 species11 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000009276.

Cross-references

EnsemblENSRNOG00000009276 (Schip1)
RGD1309962 (Schip1)
EMBLAC108233, BC169016
Uniprot/SPTREMBLB5DFD3, B5DFD3_RAT, F1M6Q1, F1M6Q1_RAT

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