R. norvegicus Gene: Sqle - ENSRNOG00000009550 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000009550
NameSqle
Descriptionsqualene epoxidase [Source:RGD Symbol;Acc:3755]
OrganismRattus norvegicus (rat)
Synonym(s)erg1, q4v8l3, se

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.64e3
  • 1.64e3
94.01627
  • 94.01627
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
2.21e3
  • 2.21e3
91.94660
  • 91.94660
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
2.24e3
  • 2.24e3
91.83521
  • 91.83521
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
2.33e3
  • 2.33e3
91.49400
  • 91.49400
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
2.75e3
  • 2.75e3
  • 3.98e3
89.95649
  • 89.95649
  • 85.49174
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.93e3
  • 2.93e3
  • 5.23e3
89.33417
  • 89.33417
  • 80.92410
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
3.54e3
  • 3.54e3
87.08068
  • 87.08068
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
3.81e3
  • 3.81e3
86.11584
  • 86.11584
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.99e3
  • 3.99e3
85.43378
  • 85.43378
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
4.43e3
  • 4.43e3
83.84721
  • 83.84721
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
4.49e3
  • 4.49e3
83.61444
  • 83.61444
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
4.54e3
  • 4.54e3
  • 4.89e3
83.42773
  • 83.42773
  • 82.15764
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.61e3
  • 4.61e3
  • 5.41e3
83.19772
  • 83.19772
  • 80.28231
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
6.39e3
  • 6.39e3
76.70806
  • 76.70806
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
6.88e3
  • 6.88e3
74.89485
  • 74.89485
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
8.06e3
  • 8.06e3
70.60703
  • 70.60703
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
8.94e3
  • 8.94e3
67.38458
  • 67.38458
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
9.17e3
  • 9.17e3
66.57034
  • 66.57034
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
9.71e3
  • 9.71e3
64.60222
  • 64.60222
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
62.97425
  • 62.97425
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
57.85363
  • 57.85363
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLBC097330, D37920
EnsemblENSRNOG00000009550 (Sqle)
RGD3755 (Sqle)
Uniprot/SWISSPROTERG1_RAT, P52020

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