R. norvegicus Gene: Tmem55b - ENSRNOG00000009948 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000009948
NameTmem55b
Descriptiontransmembrane protein 55B [Source:RGD Symbol;Acc:1307475]
OrganismRattus norvegicus (rat)
Synonym(s)loc364298, rgd1307475

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.52e3
  • 2.52e3
  • 2.61e3
90.80133
  • 90.80133
  • 90.47934
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.59e3
  • 2.59e3
  • 2.83e3
90.54182
  • 90.54182
  • 89.68002
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
3.00e3
  • 3.00e3
89.07619
  • 89.07619
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
3.29e3
  • 3.29e3
87.98840
  • 87.98840
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
3.61e3
  • 3.61e3
86.83908
  • 86.83908
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
3.77e3
  • 3.77e3
86.26130
  • 86.26130
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
3.80e3
  • 3.80e3
  • 4.97e3
86.15334
  • 86.15334
  • 81.86089
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
3.86e3
  • 3.86e3
85.91341
  • 85.91341
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
3.98e3
  • 3.98e3
85.48291
  • 85.48291
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
4.12e3
  • 4.12e3
84.95835
  • 84.95835
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
4.14e3
  • 4.14e3
84.90229
  • 84.90229
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
4.52e3
  • 4.52e3
83.53113
  • 83.53113
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
4.66e3
  • 4.66e3
83.00317
  • 83.00317
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
4.77e3
  • 4.77e3
82.58865
  • 82.58865
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
5.13e3
  • 5.13e3
81.30357
  • 81.30357
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.62e3
  • 5.62e3
79.49378
  • 79.49378
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
5.75e3
  • 5.75e3
79.01419
  • 79.01419
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
5.88e3
  • 5.88e3
78.54419
  • 78.54419
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.02e3
  • 6.02e3
  • 6.43e3
78.05741
  • 78.05741
  • 76.56301
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.54e3
  • 6.54e3
76.15779
  • 76.15779
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
8.24e3
  • 8.24e3
  • 8.34e3
69.94704
  • 69.94704
  • 69.57833
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLBC087604
EnsemblENSRNOG00000009948 (Tmem55b)
RGD1307475 (Tmem55b)
Uniprot/SWISSPROTQ5PPM8, TM55B_RAT

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